Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 AC007541.1-201ENST00000570282 1469 ntBASIC18.45■□□□□ 0.54
VTA1Q9NP79 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTA1Q9NP79 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.45■□□□□ 0.54
VTA1Q9NP79 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 CU639417.3-201ENST00000624240 1404 ntBASIC18.44■□□□□ 0.54
VTA1Q9NP79 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 API5-211ENST00000534695 560 ntTSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 AC140912.1-201ENST00000577171 1054 ntBASIC18.44■□□□□ 0.54
VTA1Q9NP79 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.44■□□□□ 0.54
VTA1Q9NP79 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTA1Q9NP79 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 GGT4P-201ENST00000623672 1708 ntBASIC18.43■□□□□ 0.54
VTA1Q9NP79 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 AL133373.2-201ENST00000623187 2828 ntBASIC18.43■□□□□ 0.54
VTA1Q9NP79 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 SPDYE17-201ENST00000412399 783 ntBASIC18.43■□□□□ 0.54
VTA1Q9NP79 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 HLA-J-202ENST00000469281 1241 ntBASIC18.43■□□□□ 0.54
VTA1Q9NP79 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VTA1Q9NP79 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VTA1Q9NP79 KRT8P12-202ENST00000472924 1397 ntBASIC18.42■□□□□ 0.54
VTA1Q9NP79 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 DFFBP1-201ENST00000433250 979 ntBASIC18.42■□□□□ 0.54
VTA1Q9NP79 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 AC104794.3-201ENST00000566840 1248 ntBASIC18.42■□□□□ 0.54
VTA1Q9NP79 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.42■□□□□ 0.54
VTA1Q9NP79 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VTA1Q9NP79 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms