Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AC063952.2-201ENST00000498792 1227 ntBASIC20.46■□□□□ 0.87
UPF2Q9HAU5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AC104640.1-201ENST00000562617 2109 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 SPDYE21P-201ENST00000413323 827 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 LINC00982-205ENST00000420957 435 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AC093827.2-201ENST00000512654 315 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 INTS4P1-201ENST00000438455 1935 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 AC243591.1-201ENST00000452967 1364 ntBASIC20.45■□□□□ 0.86
UPF2Q9HAU5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF2Q9HAU5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 MINOS1P3-201ENST00000457048 203 ntBASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AC091607.1-201ENST00000490318 1060 ntBASIC20.44■□□□□ 0.86
UPF2Q9HAU5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AC092384.3-202ENST00000564646 2873 ntBASIC20.44■□□□□ 0.86
UPF2Q9HAU5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AL365209.1-201ENST00000624418 6473 ntBASIC20.44■□□□□ 0.86
UPF2Q9HAU5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 AC010491.1-201ENST00000563101 2797 ntBASIC20.44■□□□□ 0.86
UPF2Q9HAU5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms