Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 MIR4321-201ENST00000592276 80 ntBASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 AC233724.13-201ENST00000598383 410 ntBASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 AC018665.1-201ENST00000622927 1362 ntBASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP4Q9C0A0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP4Q9C0A0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 RN7SL399P-201ENST00000471648 279 ntBASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 AL365330.1-201ENST00000607459 531 ntBASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 AL158212.4-201ENST00000624062 1286 ntBASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms