Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 AL645728.1-201ENST00000366221 2101 ntBASIC17.25■□□□□ 0.35
LRRC3Q9BY71 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 HLA-V-204ENST00000476601 1289 ntBASIC17.25■□□□□ 0.35
LRRC3Q9BY71 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 AC239800.4-201ENST00000603712 296 ntBASIC17.25■□□□□ 0.35
LRRC3Q9BY71 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.25■□□□□ 0.35
LRRC3Q9BY71 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC3Q9BY71 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AL512652.2-201ENST00000625156 1716 ntBASIC17.24■□□□□ 0.35
LRRC3Q9BY71 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 SERBP1P5-201ENST00000510079 1181 ntBASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AL391256.1-201ENST00000443260 1855 ntBASIC17.24■□□□□ 0.35
LRRC3Q9BY71 AL023806.1-201ENST00000603994 1649 ntBASIC17.24■□□□□ 0.35
LRRC3Q9BY71 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC3Q9BY71 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms