Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AP006288.1-201ENST00000446065 395 ntBASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AL513480.1-201ENST00000451731 511 ntBASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AC112482.1-201ENST00000492080 688 ntBASIC11.62□□□□□ -0.55
UPK3BQ9BT76 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AC124947.2-201ENST00000547118 1133 ntBASIC11.62□□□□□ -0.55
UPK3BQ9BT76 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AC068137.2-201ENST00000605408 478 ntBASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK3BQ9BT76 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 HCG4-201ENST00000418983 998 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC004967.1-201ENST00000453589 447 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL031432.2-201ENST00000566714 459 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL928711.1-201ENST00000570165 459 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC091167.2-201ENST00000579581 588 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 TOP3BP1-201ENST00000420768 1380 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL021920.2-201ENST00000624828 1351 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AL353732.1-201ENST00000569618 1459 ntBASIC11.61□□□□□ -0.55
UPK3BQ9BT76 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK3BQ9BT76 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms