Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTPN18Q99952 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN18Q99952 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN18Q99952 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.77■□□□□ 0.6
PTPN18Q99952 RNA5SP412-201ENST00000516234 123 ntBASIC18.77■□□□□ 0.6
PTPN18Q99952 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PTPN18Q99952 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.77■□□□□ 0.6
PTPN18Q99952 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN18Q99952 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.77■□□□□ 0.6
PTPN18Q99952 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PTPN18Q99952 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN18Q99952 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN18Q99952 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN18Q99952 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.77■□□□□ 0.59
PTPN18Q99952 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN18Q99952 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN18Q99952 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PTPN18Q99952 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTPN18Q99952 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN18Q99952 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN18Q99952 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN18Q99952 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN18Q99952 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 AC092068.3-201ENST00000587894 2016 ntBASIC18.76■□□□□ 0.59
PTPN18Q99952 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN18Q99952 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN18Q99952 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN18Q99952 MIR5189-201ENST00000577370 114 ntBASIC18.76■□□□□ 0.59
PTPN18Q99952 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPN18Q99952 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPN18Q99952 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN18Q99952 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN18Q99952 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN18Q99952 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN18Q99952 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 BRWD1P1-201ENST00000401091 371 ntBASIC18.75■□□□□ 0.59
PTPN18Q99952 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN18Q99952 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PTPN18Q99952 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN18Q99952 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN18Q99952 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN18Q99952 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN18Q99952 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTPN18Q99952 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN18Q99952 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN18Q99952 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 ACTG1P3-201ENST00000431775 1114 ntBASIC18.74■□□□□ 0.59
PTPN18Q99952 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN18Q99952 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN18Q99952 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPN18Q99952 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms