Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 RNF216P1-203ENST00000404404 2427 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 UBALD1-205ENST00000590891 2641 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 MRPS18AP1-201ENST00000414458 589 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AC241585.1-201ENST00000433527 519 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 MTND6P24-201ENST00000440466 518 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AC004890.2-204ENST00000481968 304 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AL590560.3-201ENST00000623350 461 ntBASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC85AQ96PX6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 HLA-H-201ENST00000383620 1096 ntBASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AC015922.1-201ENST00000421102 1152 ntBASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 TERF1P3-201ENST00000505638 1227 ntBASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 RNA5SP410-201ENST00000516285 106 ntBASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AC008761.3-201ENST00000624803 892 ntBASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms