Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 PDPK2P-202ENST00000562415 1191 ntBASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AC092865.6-201ENST00000642101 219 ntBASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 MTHFR-217ENST00000641820 1569 ntBASIC17.11■□□□□ 0.33
CSPG4P5Q96PW8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 POU5F1P6-201ENST00000466990 990 ntBASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CSPG4P5Q96PW8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 AC018695.7-201ENST00000624587 2492 ntBASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 AC092474.2-201ENST00000424288 719 ntBASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CSPG4P5Q96PW8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms