Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MPDU1-223ENST00000582151 728 ntBASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 AC073389.1-201ENST00000595595 795 ntBASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 AC021097.1-201ENST00000607902 574 ntBASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC46A1Q96NT5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 HLA-V-201ENST00000429037 534 ntBASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TUBB8P12-201ENST00000308911 1335 ntBASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TUBB7P-202ENST00000428444 1305 ntBASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TUBB8P7-204ENST00000567960 1332 ntBASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC46A1Q96NT5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SLC46A1Q96NT5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms