Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC084121.4-201ENST00000641598 221 ntBASIC22.16■■□□□ 1.14
CFAP53Q96M91 AF228730.8-201ENST00000642140 221 ntBASIC22.16■■□□□ 1.14
CFAP53Q96M91 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP53Q96M91 AC073439.1-201ENST00000624121 1774 ntBASIC22.16■■□□□ 1.14
CFAP53Q96M91 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CFAP53Q96M91 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP53Q96M91 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP53Q96M91 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 PCGF3-213ENST00000620529 1899 ntBASIC22.15■■□□□ 1.14
CFAP53Q96M91 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP53Q96M91 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 FLJ38576-201ENST00000623820 2459 ntBASIC22.15■■□□□ 1.14
CFAP53Q96M91 AGGF1P2-201ENST00000426656 2106 ntBASIC22.15■■□□□ 1.14
CFAP53Q96M91 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP53Q96M91 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP53Q96M91 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.14
CFAP53Q96M91 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CFAP53Q96M91 KRT18P28-201ENST00000453838 1332 ntBASIC22.14■■□□□ 1.14
CFAP53Q96M91 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.14■■□□□ 1.14
CFAP53Q96M91 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 MIR346-201ENST00000362234 95 ntBASIC22.14■■□□□ 1.13
CFAP53Q96M91 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 TSEN15P1-201ENST00000423257 515 ntBASIC22.14■■□□□ 1.13
CFAP53Q96M91 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP53Q96M91 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP53Q96M91 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP53Q96M91 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
CFAP53Q96M91 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CFAP53Q96M91 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CFAP53Q96M91 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms