Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 PCGF3-213ENST00000620529 1899 ntBASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 UBALD1-205ENST00000590891 2641 ntBASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 GPS2P2-201ENST00000430745 888 ntBASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.42■□□□□ 0.38
SMARCD1Q96GM5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 RBPMS2P1-201ENST00000437762 623 ntBASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AC109322.1-201ENST00000524499 1264 ntBASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AC004449.1-201ENST00000564240 433 ntBASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AC093028.1-201ENST00000622998 982 ntBASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCD1Q96GM5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms