Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC002056.1-201ENST00000395613 760 ntBASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC107918.2-201ENST00000530817 355 ntBASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 MIR4515-201ENST00000584082 81 ntBASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC091812.2-201ENST00000619081 385 ntBASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AGGF1P2-201ENST00000426656 2106 ntBASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 AL596442.2-201ENST00000610240 980 ntBASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 REXO1L3P-201ENST00000622202 1288 ntBASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SH3KBP1Q96B97 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms