Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 POM121L3P-201ENST00000419331 1163 ntBASIC16.03■□□□□ 0.16
VPS33AQ96AX1 PCED1CP-201ENST00000419887 785 ntBASIC16.03■□□□□ 0.16
VPS33AQ96AX1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AP000867.3-201ENST00000524675 377 ntBASIC16.03■□□□□ 0.16
VPS33AQ96AX1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AL353135.1-201ENST00000606729 504 ntBASIC16.03■□□□□ 0.16
VPS33AQ96AX1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 AC104819.1-201ENST00000504587 486 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 AL049597.2-201ENST00000565575 961 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 MIR3180-1-201ENST00000580374 94 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 MIR3180-3-201ENST00000584616 94 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 AC092329.2-201ENST00000598402 547 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 AC010331.1-201ENST00000611423 582 ntBASIC16.02■□□□□ 0.16
VPS33AQ96AX1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS33AQ96AX1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS33AQ96AX1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms