Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 AL355877.3-201ENST00000622820 899 ntBASIC14.96□□□□□ -0.01
PTP4A1Q93096 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.96□□□□□ -0.01
PTP4A1Q93096 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTP4A1Q93096 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PTP4A1Q93096 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PTP4A1Q93096 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PTP4A1Q93096 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PTP4A1Q93096 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SAPCD2P3-201ENST00000455031 850 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 AC087163.2-201ENST00000457299 853 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 SCARNA2-201ENST00000458748 420 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 AC008608.2-201ENST00000606089 416 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 IFNL4P1-201ENST00000607083 540 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 AL139288.1-201ENST00000623748 933 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 AC131009.4-201ENST00000624048 1740 ntBASIC14.95□□□□□ -0.02
PTP4A1Q93096 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A1Q93096 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.94□□□□□ -0.02
PTP4A1Q93096 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms