Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRQ92834 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.3■□□□□ 0.84
RPGRQ92834 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPGRQ92834 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPGRQ92834 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RPGRQ92834 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPGRQ92834 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRQ92834 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.3■□□□□ 0.84
RPGRQ92834 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPGRQ92834 AC055876.2-201ENST00000531834 546 ntBASIC20.3■□□□□ 0.84
RPGRQ92834 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.3■□□□□ 0.84
RPGRQ92834 AC020765.3-201ENST00000613051 740 ntBASIC20.3■□□□□ 0.84
RPGRQ92834 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.3■□□□□ 0.84
RPGRQ92834 AL589702.1-201ENST00000641229 1509 ntBASIC20.3■□□□□ 0.84
RPGRQ92834 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.3■□□□□ 0.84
RPGRQ92834 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRQ92834 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 AC067852.2-201ENST00000590513 2313 ntBASIC20.3■□□□□ 0.84
RPGRQ92834 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRQ92834 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPGRQ92834 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.29■□□□□ 0.84
RPGRQ92834 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 AC061975.2-201ENST00000581722 295 ntBASIC20.29■□□□□ 0.84
RPGRQ92834 AL162274.1-201ENST00000617191 1098 ntBASIC20.29■□□□□ 0.84
RPGRQ92834 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.29■□□□□ 0.84
RPGRQ92834 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.29■□□□□ 0.84
RPGRQ92834 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 PKD1P1-201ENST00000458669 6805 ntBASIC20.29■□□□□ 0.84
RPGRQ92834 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPGRQ92834 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRQ92834 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPGRQ92834 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 NEFHP1-201ENST00000412845 2629 ntBASIC20.28■□□□□ 0.84
RPGRQ92834 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RPGRQ92834 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.28■□□□□ 0.84
RPGRQ92834 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.28■□□□□ 0.84
RPGRQ92834 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRQ92834 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RPGRQ92834 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RPGRQ92834 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.28■□□□□ 0.84
RPGRQ92834 SRD5A3P1-201ENST00000603021 949 ntBASIC20.28■□□□□ 0.84
RPGRQ92834 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRQ92834 AL139011.1-202ENST00000642063 584 ntBASIC20.28■□□□□ 0.84
RPGRQ92834 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 AL391256.1-201ENST00000443260 1855 ntBASIC20.28■□□□□ 0.84
RPGRQ92834 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRQ92834 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRQ92834 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms