Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 KRT8P39-201ENST00000396270 1433 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.67■□□□□ 0.58
USP6NLQ92738 LINC02012-201ENST00000608206 1725 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
USP6NLQ92738 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
USP6NLQ92738 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.67■□□□□ 0.58
USP6NLQ92738 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
USP6NLQ92738 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.67■□□□□ 0.58
USP6NLQ92738 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 SRD5A3P1-201ENST00000603021 949 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.67■□□□□ 0.58
USP6NLQ92738 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 MIR6805-201ENST00000615055 62 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.67■□□□□ 0.58
USP6NLQ92738 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
USP6NLQ92738 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP6NLQ92738 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6NLQ92738 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 KRT8P12-202ENST00000472924 1397 ntBASIC18.67■□□□□ 0.58
USP6NLQ92738 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
USP6NLQ92738 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP6NLQ92738 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.66■□□□□ 0.58
USP6NLQ92738 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.66■□□□□ 0.58
USP6NLQ92738 AC007431.3-201ENST00000623221 587 ntBASIC18.66■□□□□ 0.58
USP6NLQ92738 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6NLQ92738 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6NLQ92738 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6NLQ92738 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP6NLQ92738 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.65■□□□□ 0.58
USP6NLQ92738 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.65■□□□□ 0.58
USP6NLQ92738 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 AC022210.1-201ENST00000449856 793 ntBASIC18.65■□□□□ 0.58
USP6NLQ92738 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP6NLQ92738 RN7SL837P-201ENST00000463010 287 ntBASIC18.65■□□□□ 0.58
USP6NLQ92738 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.65■□□□□ 0.58
USP6NLQ92738 AL033527.5-202ENST00000641632 1098 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms