Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AL645728.1-201ENST00000366221 2101 ntBASIC15.38■□□□□ 0.05
CT55Q8WUE5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC004840.1-201ENST00000636359 365 ntBASIC15.37■□□□□ 0.05
CT55Q8WUE5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CT55Q8WUE5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CT55Q8WUE5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 GK-202ENST00000378941 458 ntTSL 3 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CT55Q8WUE5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 AC024267.1-201ENST00000582320 895 ntBASIC15.36■□□□□ 0.05
CT55Q8WUE5 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.36■□□□□ 0.05
CT55Q8WUE5 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.36■□□□□ 0.05
CT55Q8WUE5 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.36■□□□□ 0.05
CT55Q8WUE5 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.36■□□□□ 0.05
CT55Q8WUE5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CT55Q8WUE5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms