Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GGT3P-204ENST00000453783 1664 ntBASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 AC007950.2-201ENST00000615045 2347 ntBASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLHC1Q8NHS4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 REXO1L3P-201ENST00000622202 1288 ntBASIC16■□□□□ 0.15
CLHC1Q8NHS4 AL139011.1-202ENST00000642063 584 ntBASIC16■□□□□ 0.15
CLHC1Q8NHS4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLHC1Q8NHS4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 AL031731.1-201ENST00000642131 2094 ntBASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 PMS2P1-201ENST00000431037 1228 ntBASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 IFNL4P1-201ENST00000607083 540 ntBASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 AL162727.3-201ENST00000635661 2787 ntBASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 SLC22A20-204ENST00000530038 1673 ntBASIC15.99■□□□□ 0.15
CLHC1Q8NHS4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms