Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.21■□□□□ 0.19
HIPK4Q8NE63 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 AL596087.1-201ENST00000400979 1969 ntBASIC16.21■□□□□ 0.19
HIPK4Q8NE63 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 RN7SL606P-201ENST00000472779 293 ntBASIC16.21■□□□□ 0.19
HIPK4Q8NE63 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.21■□□□□ 0.19
HIPK4Q8NE63 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HIPK4Q8NE63 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AL645929.1-201ENST00000420084 975 ntBASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AP002490.2-201ENST00000524791 560 ntBASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AL353801.3-201ENST00000609898 542 ntBASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AL592071.1-201ENST00000611956 408 ntBASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms