Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 AL627223.1-201ENST00000416693 442 ntBASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 PRYP6-201ENST00000514804 343 ntBASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 IGHV3-62-201ENST00000520057 340 ntBASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C9orf40Q8IXQ3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC005052.1-201ENST00000625181 2492 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 PCDHA14-201ENST00000506751 2298 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC005237.2-201ENST00000434368 219 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 KRT8P23-201ENST00000560090 1207 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AP000842.3-202ENST00000569238 1080 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC073389.1-201ENST00000595595 795 ntBASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf40Q8IXQ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
C9orf40Q8IXQ3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms