Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 SPDYE13P-201ENST00000445314 798 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AC090616.6-201ENST00000582640 721 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 GGT4P-201ENST00000623672 1708 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AC126755.1-201ENST00000525846 6405 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AC006449.6-201ENST00000612330 2296 ntBASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 AC116407.4-201ENST00000623319 1061 ntBASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM42Q8IWZ5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.64■□□□□ 0.26
TRIM42Q8IWZ5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM42Q8IWZ5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 UPK3BP1-201ENST00000428678 509 ntBASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AC246785.2-201ENST00000432512 513 ntBASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 AC011467.2-201ENST00000598425 242 ntBASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM42Q8IWZ5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.63■□□□□ 0.25
TRIM42Q8IWZ5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms