Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.57■□□□□ 0.24
APLFQ8IW19 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APLFQ8IW19 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.56■□□□□ 0.24
APLFQ8IW19 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
APLFQ8IW19 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
APLFQ8IW19 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.56■□□□□ 0.24
APLFQ8IW19 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
APLFQ8IW19 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 KRT18P3-201ENST00000451602 1288 ntBASIC16.56■□□□□ 0.24
APLFQ8IW19 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
APLFQ8IW19 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.56■□□□□ 0.24
APLFQ8IW19 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 NKAPP1-205ENST00000585790 367 ntBASIC16.56■□□□□ 0.24
APLFQ8IW19 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 AL691403.2-201ENST00000618460 490 ntBASIC16.56■□□□□ 0.24
APLFQ8IW19 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.56■□□□□ 0.24
APLFQ8IW19 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APLFQ8IW19 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
APLFQ8IW19 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.55■□□□□ 0.24
APLFQ8IW19 LAGE3P1-201ENST00000425356 484 ntBASIC16.55■□□□□ 0.24
APLFQ8IW19 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.55■□□□□ 0.24
APLFQ8IW19 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 AC040169.1-201ENST00000565382 521 ntBASIC16.55■□□□□ 0.24
APLFQ8IW19 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.55■□□□□ 0.24
APLFQ8IW19 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.55■□□□□ 0.24
APLFQ8IW19 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.55■□□□□ 0.24
APLFQ8IW19 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.55■□□□□ 0.24
APLFQ8IW19 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.55■□□□□ 0.24
APLFQ8IW19 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APLFQ8IW19 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 AC144831.1-201ENST00000573312 2656 ntBASIC16.54■□□□□ 0.24
APLFQ8IW19 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
APLFQ8IW19 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APLFQ8IW19 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.54■□□□□ 0.24
APLFQ8IW19 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 DNAJB3-201ENST00000446806 729 ntBASIC16.54■□□□□ 0.24
APLFQ8IW19 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APLFQ8IW19 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.54■□□□□ 0.24
APLFQ8IW19 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.54■□□□□ 0.24
APLFQ8IW19 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms