Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 MIR4751-201ENST00000578027 74 ntBASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 AC020765.3-201ENST00000613051 740 ntBASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 MIR7706-201ENST00000613747 67 ntBASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL3Q8IVW4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.08■□□□□ 0.33
CDKL3Q8IVW4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AL031284.1-201ENST00000419297 478 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PRSS29P-201ENST00000440800 595 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 FAM185BP-201ENST00000443595 716 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AC108751.1-201ENST00000490852 363 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AP002469.2-201ENST00000531724 424 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 ACTL9-202ENST00000612068 1252 ntBASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL3Q8IVW4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms