Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 SPDYE18-201ENST00000510091 1050 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 SDHAP3-202ENST00000515467 728 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 CHCHD2P3-201ENST00000603038 451 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 AC008494.3-201ENST00000606615 944 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 IGHV3-72-202ENST00000621503 303 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 AC007613.1-201ENST00000572811 2597 ntBASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS4Q8IUM7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
NPAS4Q8IUM7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 GPAA1P2-202ENST00000606848 1787 ntBASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AC011495.1-201ENST00000498085 584 ntBASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 IGHV3-71-201ENST00000523324 359 ntBASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AC055876.2-201ENST00000531834 546 ntBASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS4Q8IUM7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AL645728.1-201ENST00000366221 2101 ntBASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AL023806.1-201ENST00000603994 1649 ntBASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AL512384.1-201ENST00000406683 331 ntBASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 SRD5A3P1-201ENST00000603021 949 ntBASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms