Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 AC138761.1-201ENST00000584393 385 ntBASIC18.47■□□□□ 0.55
TRIM50Q86XT4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 AC003101.2-201ENST00000612557 442 ntBASIC18.47■□□□□ 0.55
TRIM50Q86XT4 AC018529.1-201ENST00000613063 361 ntBASIC18.47■□□□□ 0.55
TRIM50Q86XT4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 AC236430.1-201ENST00000402231 743 ntBASIC18.46■□□□□ 0.55
TRIM50Q86XT4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 AL512652.2-201ENST00000625156 1716 ntBASIC18.46■□□□□ 0.55
TRIM50Q86XT4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM50Q86XT4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 SPDYE12P-201ENST00000618416 771 ntBASIC18.45■□□□□ 0.54
TRIM50Q86XT4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM50Q86XT4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms