Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC106820.2-201ENST00000563775 3264 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AL033527.5-201ENST00000641382 801 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 KLF2P4-201ENST00000451959 1225 ntBASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC103810.3-201ENST00000583567 96 ntBASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 HAUS4P1-201ENST00000406739 1145 ntBASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SDHAP3-202ENST00000515467 728 ntBASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 C2orf69P2-201ENST00000562032 1123 ntBASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13BQ7Z7G8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 KRT18P34-201ENST00000488218 1270 ntBASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 AL589702.1-201ENST00000641229 1509 ntBASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 NOC2LP2-201ENST00000407594 1944 ntBASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 MIR1247-201ENST00000408206 136 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms