Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN20Q4JDL3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 AC040169.1-201ENST00000565382 521 ntBASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 AC099522.2-201ENST00000607001 744 ntBASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN20Q4JDL3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 CYP2T1P-202ENST00000641596 2535 ntBASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 AL078644.1-201ENST00000609881 752 ntBASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN20Q4JDL3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 AC002347.1-201ENST00000569543 541 ntBASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 AC091812.2-201ENST00000619081 385 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms