Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 REXO1L8P-201ENST00000604378 1897 ntBASIC21.54■■□□□ 1.04
CCDC27Q2M243 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 CEND1P1-201ENST00000451006 455 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 AC105233.2-201ENST00000523697 349 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 AF228730.5-201ENST00000530288 346 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 KRT8P23-201ENST00000560090 1207 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 MIR3687-2-201ENST00000577708 61 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 AC022145.2-201ENST00000598203 171 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 MIR3687-1-201ENST00000614492 61 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 AC023511.2-201ENST00000618803 211 ntBASIC21.53■■□□□ 1.04
CCDC27Q2M243 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC27Q2M243 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC27Q2M243 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 U82695.1-201ENST00000635752 1889 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 AL589702.1-201ENST00000641229 1509 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 SPDYE11-202ENST00000450699 704 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 SPDYE9P-201ENST00000570642 692 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 AC027307.2-201ENST00000591252 911 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 SPDYE10P-202ENST00000612005 668 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 SPDYE8P-202ENST00000612377 668 ntBASIC21.52■■□□□ 1.04
CCDC27Q2M243 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC27Q2M243 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC27Q2M243 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CCDC27Q2M243 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC27Q2M243 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.52■■□□□ 1.03
CCDC27Q2M243 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.52■■□□□ 1.03
CCDC27Q2M243 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC27Q2M243 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 AP000842.3-202ENST00000569238 1080 ntBASIC21.51■■□□□ 1.03
CCDC27Q2M243 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC27Q2M243 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC27Q2M243 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC27Q2M243 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC27Q2M243 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC27Q2M243 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms