Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 U82695.1-201ENST00000635752 1889 ntBASIC19.74■□□□□ 0.75
PDS5AQ29RF7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.74■□□□□ 0.75
PDS5AQ29RF7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.74■□□□□ 0.75
PDS5AQ29RF7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 MIR4321-201ENST00000592276 80 ntBASIC19.74■□□□□ 0.75
PDS5AQ29RF7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 MTND6P24-201ENST00000440466 518 ntBASIC19.73■□□□□ 0.75
PDS5AQ29RF7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 TERF1P3-201ENST00000505638 1227 ntBASIC19.73■□□□□ 0.75
PDS5AQ29RF7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDS5AQ29RF7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 COX20P2-201ENST00000452636 358 ntBASIC19.72■□□□□ 0.75
PDS5AQ29RF7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 LINC02560-201ENST00000596379 459 ntBASIC19.72■□□□□ 0.75
PDS5AQ29RF7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 AC009118.2-201ENST00000613275 655 ntBASIC19.72■□□□□ 0.75
PDS5AQ29RF7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms