Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.47■□□□□ 0.39
USP46P62068 IGHV3-62-201ENST00000520057 340 ntBASIC17.47■□□□□ 0.39
USP46P62068 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.47■□□□□ 0.39
USP46P62068 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 SLC25A39P2-201ENST00000537614 270 ntBASIC17.46■□□□□ 0.39
USP46P62068 AC027307.2-201ENST00000591252 911 ntBASIC17.46■□□□□ 0.39
USP46P62068 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.46■□□□□ 0.39
USP46P62068 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.46■□□□□ 0.39
USP46P62068 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
USP46P62068 KRT8P39-201ENST00000396270 1433 ntBASIC17.46■□□□□ 0.39
USP46P62068 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP46P62068 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
USP46P62068 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.46■□□□□ 0.38
USP46P62068 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.45■□□□□ 0.38
USP46P62068 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.45■□□□□ 0.38
USP46P62068 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
USP46P62068 KRT8P23-201ENST00000560090 1207 ntBASIC17.45■□□□□ 0.38
USP46P62068 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.45■□□□□ 0.38
USP46P62068 AP000842.3-202ENST00000569238 1080 ntBASIC17.45■□□□□ 0.38
USP46P62068 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.45■□□□□ 0.38
USP46P62068 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 AC008267.7-201ENST00000624570 1194 ntBASIC17.45■□□□□ 0.38
USP46P62068 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms