Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CKS1BP61024 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 KRT89P-201ENST00000620027 1478 ntBASIC11.72□□□□□ -0.53
CKS1BP61024 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.72□□□□□ -0.53
CKS1BP61024 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC009154.2-201ENST00000621177 724 ntBASIC11.72□□□□□ -0.53
CKS1BP61024 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CKS1BP61024 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AP006294.2-201ENST00000641667 209 ntBASIC11.72□□□□□ -0.53
CKS1BP61024 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS1BP61024 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS1BP61024 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS1BP61024 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CKS1BP61024 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
CKS1BP61024 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CKS1BP61024 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CKS1BP61024 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS1BP61024 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 AC008550.1-201ENST00000511500 884 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms