Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AC010980.2-201ENST00000587099 1412 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 AC027601.5-201ENST00000624065 2482 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB5BP61020 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RAB5BP61020 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 DDX43P3-201ENST00000441064 443 ntBASIC13.01□□□□□ -0.33
RAB5BP61020 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB5BP61020 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 KRT18P14-201ENST00000534205 1250 ntBASIC13.01□□□□□ -0.33
RAB5BP61020 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB5BP61020 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB5BP61020 KRT17P1-201ENST00000399211 1546 ntBASIC13.01□□□□□ -0.33
RAB5BP61020 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB5BP61020 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB5BP61020 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB5BP61020 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB5BP61020 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13□□□□□ -0.33
RAB5BP61020 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB5BP61020 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13□□□□□ -0.33
RAB5BP61020 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13□□□□□ -0.33
RAB5BP61020 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
RAB5BP61020 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB5BP61020 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB5BP61020 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms