Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.47■□□□□ 0.07
PER3P56645 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PER3P56645 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.47■□□□□ 0.07
PER3P56645 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.47■□□□□ 0.07
PER3P56645 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.47■□□□□ 0.07
PER3P56645 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.47■□□□□ 0.07
PER3P56645 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 PCDHA14-201ENST00000506751 2298 ntBASIC15.47■□□□□ 0.07
PER3P56645 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.47■□□□□ 0.07
PER3P56645 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PER3P56645 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PER3P56645 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 CROCCP2-202ENST00000412962 2773 ntBASIC15.46■□□□□ 0.07
PER3P56645 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PER3P56645 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.46■□□□□ 0.07
PER3P56645 AC004461.1-201ENST00000412461 403 ntBASIC15.46■□□□□ 0.07
PER3P56645 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.46■□□□□ 0.07
PER3P56645 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 AC112191.1-201ENST00000523689 701 ntBASIC15.46■□□□□ 0.07
PER3P56645 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 AJ011932.1-201ENST00000621707 465 ntBASIC15.46■□□□□ 0.07
PER3P56645 LINC00628-201ENST00000628516 1289 ntBASIC15.46■□□□□ 0.07
PER3P56645 AC105339.1-204ENST00000636249 355 ntBASIC15.46■□□□□ 0.07
PER3P56645 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PER3P56645 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.46■□□□□ 0.07
PER3P56645 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PER3P56645 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PER3P56645 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.45■□□□□ 0.06
PER3P56645 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PER3P56645 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PER3P56645 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.45■□□□□ 0.06
PER3P56645 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.45■□□□□ 0.06
PER3P56645 AC069262.1-201ENST00000539058 672 ntBASIC15.45■□□□□ 0.06
PER3P56645 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.45■□□□□ 0.06
PER3P56645 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms