Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S2P56377 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S2P56377 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S2P56377 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S2P56377 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S2P56377 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S2P56377 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S2P56377 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S2P56377 AL591424.1-201ENST00000442569 1213 ntBASIC16.18■□□□□ 0.18
AP1S2P56377 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.18■□□□□ 0.18
AP1S2P56377 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 AC109635.5-201ENST00000533593 962 ntBASIC16.18■□□□□ 0.18
AP1S2P56377 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S2P56377 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S2P56377 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S2P56377 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S2P56377 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
AP1S2P56377 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.17■□□□□ 0.18
AP1S2P56377 AC120114.3-201ENST00000611923 658 ntBASIC16.17■□□□□ 0.18
AP1S2P56377 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.17■□□□□ 0.18
AP1S2P56377 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
AP1S2P56377 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.17■□□□□ 0.18
AP1S2P56377 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 MTHFR-217ENST00000641820 1569 ntBASIC16.17■□□□□ 0.18
AP1S2P56377 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S2P56377 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
AP1S2P56377 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S2P56377 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP1S2P56377 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S2P56377 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
AP1S2P56377 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
AP1S2P56377 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.16■□□□□ 0.18
AP1S2P56377 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.16■□□□□ 0.18
AP1S2P56377 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms