Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.41■□□□□ 0.22
CDKN2DP55273 AL513480.1-201ENST00000451731 511 ntBASIC16.41■□□□□ 0.22
CDKN2DP55273 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKN2DP55273 AC006449.6-201ENST00000612330 2296 ntBASIC16.41■□□□□ 0.22
CDKN2DP55273 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKN2DP55273 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDKN2DP55273 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKN2DP55273 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKN2DP55273 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKN2DP55273 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKN2DP55273 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 RNU1-129P-201ENST00000384064 167 ntBASIC16.4■□□□□ 0.22
CDKN2DP55273 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.4■□□□□ 0.22
CDKN2DP55273 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDKN2DP55273 HCG4B-203ENST00000450128 991 ntBASIC16.4■□□□□ 0.22
CDKN2DP55273 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKN2DP55273 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKN2DP55273 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKN2DP55273 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 U1.21-201ENST00000580816 167 ntBASIC16.4■□□□□ 0.22
CDKN2DP55273 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKN2DP55273 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKN2DP55273 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKN2DP55273 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDKN2DP55273 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 AC008894.3-201ENST00000624324 3103 ntBASIC16.4■□□□□ 0.22
CDKN2DP55273 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDKN2DP55273 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKN2DP55273 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDKN2DP55273 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.39■□□□□ 0.22
CDKN2DP55273 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDKN2DP55273 CROCCP1-201ENST00000426910 5675 ntBASIC16.39■□□□□ 0.21
CDKN2DP55273 AC007950.2-201ENST00000615045 2347 ntBASIC16.39■□□□□ 0.21
CDKN2DP55273 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDKN2DP55273 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 AC093909.1-201ENST00000504731 1122 ntBASIC16.39■□□□□ 0.21
CDKN2DP55273 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDKN2DP55273 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDKN2DP55273 AL662844.1-201ENST00000546340 181 ntBASIC16.39■□□□□ 0.21
CDKN2DP55273 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.39■□□□□ 0.21
CDKN2DP55273 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKN2DP55273 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms