Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 HLA-H-201ENST00000383620 1096 ntBASIC15.97■□□□□ 0.15
EPHA4P54764 MIR943-201ENST00000401286 94 ntBASIC15.97■□□□□ 0.15
EPHA4P54764 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.97■□□□□ 0.15
EPHA4P54764 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.97■□□□□ 0.15
EPHA4P54764 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA4P54764 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
EPHA4P54764 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA4P54764 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.97■□□□□ 0.15
EPHA4P54764 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
EPHA4P54764 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA4P54764 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA4P54764 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA4P54764 AC073439.1-201ENST00000624121 1774 ntBASIC15.96■□□□□ 0.15
EPHA4P54764 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA4P54764 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 BASP1P1-201ENST00000430708 665 ntBASIC15.96■□□□□ 0.15
EPHA4P54764 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA4P54764 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.96■□□□□ 0.15
EPHA4P54764 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.96■□□□□ 0.15
EPHA4P54764 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.96■□□□□ 0.15
EPHA4P54764 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.96■□□□□ 0.15
EPHA4P54764 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.96■□□□□ 0.15
EPHA4P54764 AL390955.2-201ENST00000603032 514 ntBASIC15.96■□□□□ 0.15
EPHA4P54764 AC020765.3-201ENST00000613051 740 ntBASIC15.96■□□□□ 0.15
EPHA4P54764 AC018529.1-201ENST00000613063 361 ntBASIC15.96■□□□□ 0.15
EPHA4P54764 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA4P54764 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
EPHA4P54764 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA4P54764 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
EPHA4P54764 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA4P54764 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
EPHA4P54764 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.96■□□□□ 0.14
EPHA4P54764 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EPHA4P54764 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
EPHA4P54764 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
EPHA4P54764 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA4P54764 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 FAM220BP-201ENST00000377689 816 ntBASIC15.95■□□□□ 0.14
EPHA4P54764 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.95■□□□□ 0.14
EPHA4P54764 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
EPHA4P54764 STK33P1-201ENST00000423835 1218 ntBASIC15.95■□□□□ 0.14
EPHA4P54764 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA4P54764 AC093214.1-201ENST00000511688 1107 ntBASIC15.95■□□□□ 0.14
EPHA4P54764 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA4P54764 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.95■□□□□ 0.14
EPHA4P54764 AC069120.2-201ENST00000524091 540 ntBASIC15.95■□□□□ 0.14
EPHA4P54764 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA4P54764 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA4P54764 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA4P54764 AP3S2-216ENST00000617003 1561 ntBASIC15.95■□□□□ 0.14
EPHA4P54764 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA4P54764 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.95■□□□□ 0.14
EPHA4P54764 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA4P54764 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA4P54764 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA4P54764 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.94■□□□□ 0.14
EPHA4P54764 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA4P54764 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA4P54764 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA4P54764 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms