Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.27■□□□□ 0.36
EPHB3P54753 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB3P54753 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
EPHB3P54753 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB3P54753 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB3P54753 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB3P54753 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB3P54753 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
EPHB3P54753 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHB3P54753 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
EPHB3P54753 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 CETN4P-206ENST00000642099 2168 ntBASIC17.26■□□□□ 0.35
EPHB3P54753 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHB3P54753 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB3P54753 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
EPHB3P54753 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHB3P54753 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHB3P54753 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 RN7SL828P-201ENST00000607615 303 ntBASIC17.26■□□□□ 0.35
EPHB3P54753 AL589739.1-201ENST00000607720 493 ntBASIC17.26■□□□□ 0.35
EPHB3P54753 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EPHB3P54753 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB3P54753 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.25■□□□□ 0.35
EPHB3P54753 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.25■□□□□ 0.35
EPHB3P54753 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 TSSK5P-201ENST00000423978 907 ntBASIC17.25■□□□□ 0.35
EPHB3P54753 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.25■□□□□ 0.35
EPHB3P54753 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 AC024267.1-201ENST00000582320 895 ntBASIC17.25■□□□□ 0.35
EPHB3P54753 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB3P54753 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.25■□□□□ 0.35
EPHB3P54753 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 GPAA1P2-202ENST00000606848 1787 ntBASIC17.25■□□□□ 0.35
EPHB3P54753 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB3P54753 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 AC022144.1-201ENST00000602255 1580 ntBASIC17.24■□□□□ 0.35
EPHB3P54753 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHB3P54753 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHB3P54753 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.24■□□□□ 0.35
EPHB3P54753 AC015922.1-201ENST00000421102 1152 ntBASIC17.24■□□□□ 0.35
EPHB3P54753 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms