Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
PMS1P54277 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.27■□□□□ 0.52
PMS1P54277 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PMS1P54277 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 LINC01144-201ENST00000626198 1710 ntBASIC18.27■□□□□ 0.52
PMS1P54277 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PMS1P54277 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.27■□□□□ 0.52
PMS1P54277 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 PRSS29P-201ENST00000440800 595 ntBASIC18.27■□□□□ 0.52
PMS1P54277 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 CXCL1P1-201ENST00000502804 216 ntBASIC18.27■□□□□ 0.52
PMS1P54277 IGHV3-22-201ENST00000520721 359 ntBASIC18.27■□□□□ 0.52
PMS1P54277 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.27■□□□□ 0.52
PMS1P54277 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 MIR4751-201ENST00000578027 74 ntBASIC18.27■□□□□ 0.52
PMS1P54277 MIR4515-201ENST00000584082 81 ntBASIC18.27■□□□□ 0.52
PMS1P54277 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.27■□□□□ 0.52
PMS1P54277 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PMS1P54277 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.27■□□□□ 0.52
PMS1P54277 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMS1P54277 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.27■□□□□ 0.51
PMS1P54277 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
PMS1P54277 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.27■□□□□ 0.51
PMS1P54277 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PMS1P54277 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.27■□□□□ 0.51
PMS1P54277 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.26■□□□□ 0.51
PMS1P54277 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PMS1P54277 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.26■□□□□ 0.51
PMS1P54277 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
PMS1P54277 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PMS1P54277 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.26■□□□□ 0.51
PMS1P54277 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.26■□□□□ 0.51
PMS1P54277 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PMS1P54277 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.26■□□□□ 0.51
PMS1P54277 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.26■□□□□ 0.51
PMS1P54277 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMS1P54277 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms