Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PDE6CP51160 AC023274.1-201ENST00000418278 595 ntBASIC17.98■□□□□ 0.47
PDE6CP51160 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6CP51160 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6CP51160 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6CP51160 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDE6CP51160 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PDE6CP51160 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6CP51160 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6CP51160 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6CP51160 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDE6CP51160 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6CP51160 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PDE6CP51160 AL391005.1-201ENST00000623953 2435 ntBASIC17.97■□□□□ 0.47
PDE6CP51160 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDE6CP51160 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6CP51160 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 AC107918.2-201ENST00000530817 355 ntBASIC17.97■□□□□ 0.47
PDE6CP51160 AC096734.2-201ENST00000562054 433 ntBASIC17.97■□□□□ 0.47
PDE6CP51160 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6CP51160 AL691403.2-201ENST00000618460 490 ntBASIC17.97■□□□□ 0.47
PDE6CP51160 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 AC131009.4-201ENST00000624048 1740 ntBASIC17.97■□□□□ 0.47
PDE6CP51160 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6CP51160 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6CP51160 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6CP51160 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6CP51160 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6CP51160 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6CP51160 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6CP51160 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6CP51160 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 KRT18P2-201ENST00000447938 1258 ntBASIC17.96■□□□□ 0.47
PDE6CP51160 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6CP51160 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6CP51160 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6CP51160 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6CP51160 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6CP51160 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDE6CP51160 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.96■□□□□ 0.46
PDE6CP51160 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 AL353732.1-201ENST00000569618 1459 ntBASIC17.95■□□□□ 0.46
PDE6CP51160 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE6CP51160 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms