Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.82□□□□□ -0.04
SRP9P49458 SPDYE21P-201ENST00000413323 827 ntBASIC14.82□□□□□ -0.04
SRP9P49458 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.82□□□□□ -0.04
SRP9P49458 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.82□□□□□ -0.04
SRP9P49458 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.82□□□□□ -0.04
SRP9P49458 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.82□□□□□ -0.04
SRP9P49458 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 AC132938.5-201ENST00000624980 1813 ntBASIC14.82□□□□□ -0.04
SRP9P49458 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 SIGLEC16-201ENST00000599858 1437 ntBASIC14.82□□□□□ -0.04
SRP9P49458 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SRP9P49458 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SRP9P49458 AC126177.1-201ENST00000547829 2218 ntBASIC14.81□□□□□ -0.04
SRP9P49458 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.81□□□□□ -0.04
SRP9P49458 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 AKR1C7P-201ENST00000305623 895 ntBASIC14.81□□□□□ -0.04
SRP9P49458 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.81□□□□□ -0.04
SRP9P49458 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP9P49458 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP9P49458 EMBP1-201ENST00000458200 901 ntBASIC14.81□□□□□ -0.04
SRP9P49458 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.81□□□□□ -0.04
SRP9P49458 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SRP9P49458 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP9P49458 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SRP9P49458 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP9P49458 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.8□□□□□ -0.04
SRP9P49458 AC124947.2-201ENST00000547118 1133 ntBASIC14.8□□□□□ -0.04
SRP9P49458 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 AC073592.4-201ENST00000623827 446 ntBASIC14.8□□□□□ -0.04
SRP9P49458 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms