Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
KDM5CP41229 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
KDM5CP41229 CROCCP2-202ENST00000412962 2773 ntBASIC24.45■■□□□ 1.5
KDM5CP41229 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM5CP41229 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC24.45■■□□□ 1.5
KDM5CP41229 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.45■■□□□ 1.5
KDM5CP41229 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM5CP41229 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM5CP41229 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
KDM5CP41229 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.45■■□□□ 1.5
KDM5CP41229 BRI3BPP1-201ENST00000594224 787 ntBASIC24.45■■□□□ 1.5
KDM5CP41229 LINC01115-203ENST00000606068 577 ntBASIC24.45■■□□□ 1.5
KDM5CP41229 ABBA01031660.1-201ENST00000635219 756 ntBASIC24.45■■□□□ 1.5
KDM5CP41229 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
KDM5CP41229 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KDM5CP41229 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.45■■□□□ 1.5
KDM5CP41229 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
KDM5CP41229 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KDM5CP41229 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM5CP41229 GGT4P-201ENST00000623672 1708 ntBASIC24.44■■□□□ 1.5
KDM5CP41229 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24.44■■□□□ 1.5
KDM5CP41229 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 AMT-232ENST00000636199 1546 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
KDM5CP41229 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 FO681548.1-201ENST00000455617 1132 ntBASIC24.44■■□□□ 1.5
KDM5CP41229 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC24.44■■□□□ 1.5
KDM5CP41229 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM5CP41229 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC24.44■■□□□ 1.5
KDM5CP41229 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC24.44■■□□□ 1.5
KDM5CP41229 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 DEK-201ENST00000244776 1441 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM5CP41229 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
KDM5CP41229 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM5CP41229 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM5CP41229 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
KDM5CP41229 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
KDM5CP41229 LBX2-201ENST00000341396 886 ntTSL 3 BASIC24.43■■□□□ 1.5
KDM5CP41229 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 NME6-203ENST00000415644 849 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC24.43■■□□□ 1.5
KDM5CP41229 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 AC124283.3-201ENST00000570869 594 ntBASIC24.43■■□□□ 1.5
KDM5CP41229 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC24.43■■□□□ 1.5
KDM5CP41229 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 PCDHB18P-201ENST00000524813 2368 ntBASIC24.43■■□□□ 1.5
KDM5CP41229 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
KDM5CP41229 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
KDM5CP41229 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
KDM5CP41229 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM5CP41229 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM5CP41229 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM5CP41229 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM5CP41229 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KDM5CP41229 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
KDM5CP41229 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC24.42■■□□□ 1.5
KDM5CP41229 CSF2RBP1-201ENST00000447905 391 ntBASIC24.42■■□□□ 1.5
KDM5CP41229 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC24.42■■□□□ 1.5
KDM5CP41229 AC036164.1-201ENST00000570544 333 ntBASIC24.42■■□□□ 1.5
KDM5CP41229 DERL2-202ENST00000570848 657 ntTSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 AC020765.3-201ENST00000613051 740 ntBASIC24.42■■□□□ 1.5
KDM5CP41229 AL139099.5-201ENST00000635274 300 ntBASIC24.42■■□□□ 1.5
KDM5CP41229 AL645608.8-201ENST00000606034 2086 ntBASIC24.42■■□□□ 1.5
KDM5CP41229 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KDM5CP41229 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
KDM5CP41229 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM5CP41229 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM5CP41229 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM5CP41229 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM5CP41229 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC24.42■■□□□ 1.5
KDM5CP41229 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC24.42■■□□□ 1.5
KDM5CP41229 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
KDM5CP41229 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
KDM5CP41229 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KDM5CP41229 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms