Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.12■■□□□ 1.13
USP6P35125 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.12■■□□□ 1.13
USP6P35125 AC112492.5-201ENST00000421897 457 ntBASIC22.12■■□□□ 1.13
USP6P35125 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.12■■□□□ 1.13
USP6P35125 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC22.12■■□□□ 1.13
USP6P35125 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
USP6P35125 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
USP6P35125 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC22.12■■□□□ 1.13
USP6P35125 AC093726.1-201ENST00000608064 963 ntBASIC22.12■■□□□ 1.13
USP6P35125 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 AL645608.8-201ENST00000606034 2086 ntBASIC22.12■■□□□ 1.13
USP6P35125 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
USP6P35125 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USP6P35125 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC22.11■■□□□ 1.13
USP6P35125 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 MEP1AP4-201ENST00000423244 1087 ntBASIC22.11■■□□□ 1.13
USP6P35125 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC22.11■■□□□ 1.13
USP6P35125 EEF1DP4-201ENST00000446006 880 ntBASIC22.11■■□□□ 1.13
USP6P35125 MYCLP2-201ENST00000449268 967 ntBASIC22.11■■□□□ 1.13
USP6P35125 AC011495.1-201ENST00000498085 584 ntBASIC22.11■■□□□ 1.13
USP6P35125 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 RRP7BP-205ENST00000566851 833 ntBASIC22.11■■□□□ 1.13
USP6P35125 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC22.11■■□□□ 1.13
USP6P35125 SERF2-217ENST00000630046 862 ntTSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC22.11■■□□□ 1.13
USP6P35125 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.11■■□□□ 1.13
USP6P35125 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USP6P35125 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
USP6P35125 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
USP6P35125 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 TTTY23B-201ENST00000442790 549 ntBASIC22.1■■□□□ 1.13
USP6P35125 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC22.1■■□□□ 1.13
USP6P35125 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC22.1■■□□□ 1.13
USP6P35125 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC22.1■■□□□ 1.13
USP6P35125 AL365330.1-201ENST00000607459 531 ntBASIC22.1■■□□□ 1.13
USP6P35125 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC22.1■■□□□ 1.13
USP6P35125 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC22.1■■□□□ 1.13
USP6P35125 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
USP6P35125 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
USP6P35125 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
USP6P35125 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
USP6P35125 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
USP6P35125 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC22.09■■□□□ 1.13
USP6P35125 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC22.09■■□□□ 1.13
USP6P35125 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.09■■□□□ 1.13
USP6P35125 AC017083.2-201ENST00000608069 979 ntBASIC22.09■■□□□ 1.13
USP6P35125 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
USP6P35125 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
USP6P35125 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
USP6P35125 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC22.09■■□□□ 1.13
USP6P35125 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC22.09■■□□□ 1.13
USP6P35125 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USP6P35125 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USP6P35125 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USP6P35125 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC22.08■■□□□ 1.13
USP6P35125 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms