Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LSP1P33241 PKD1P5-201ENST00000532415 10291 ntBASIC16.72■□□□□ 0.27
LSP1P33241 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 AL391807.1-203ENST00000604392 2365 ntBASIC16.72■□□□□ 0.27
LSP1P33241 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.72■□□□□ 0.27
LSP1P33241 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.72■□□□□ 0.27
LSP1P33241 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.72■□□□□ 0.27
LSP1P33241 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.72■□□□□ 0.27
LSP1P33241 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 AC122714.2-201ENST00000502787 707 ntBASIC16.72■□□□□ 0.27
LSP1P33241 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.72■□□□□ 0.27
LSP1P33241 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LSP1P33241 AC073912.3-201ENST00000624414 853 ntBASIC16.72■□□□□ 0.27
LSP1P33241 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 GRK6P1-201ENST00000400595 1711 ntBASIC16.72■□□□□ 0.27
LSP1P33241 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LSP1P33241 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.72■□□□□ 0.27
LSP1P33241 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.72■□□□□ 0.27
LSP1P33241 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LSP1P33241 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSP1P33241 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LSP1P33241 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.71■□□□□ 0.27
LSP1P33241 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.71■□□□□ 0.27
LSP1P33241 AP003733.1-201ENST00000491725 852 ntBASIC16.71■□□□□ 0.27
LSP1P33241 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
LSP1P33241 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.71■□□□□ 0.27
LSP1P33241 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSP1P33241 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
LSP1P33241 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
LSP1P33241 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSP1P33241 AC007191.1-201ENST00000623179 2995 ntBASIC16.71■□□□□ 0.26
LSP1P33241 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms