Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR4515-201ENST00000584082 81 ntBASIC14.77□□□□□ -0.05
HOXC12P31275 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HOXC12P31275 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC12P31275 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXC12P31275 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HOXC12P31275 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HOXC12P31275 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXC12P31275 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC12P31275 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.77□□□□□ -0.05
HOXC12P31275 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
HOXC12P31275 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HOXC12P31275 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 AC020916.1-201ENST00000587762 1774 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.76□□□□□ -0.05
HOXC12P31275 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HOXC12P31275 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 FAM58CP-201ENST00000435741 640 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HOXC12P31275 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.76□□□□□ -0.05
HOXC12P31275 AC112191.1-201ENST00000523689 701 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.76□□□□□ -0.05
HOXC12P31275 AC025678.2-201ENST00000562061 970 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.76□□□□□ -0.05
HOXC12P31275 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.76□□□□□ -0.05
HOXC12P31275 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HOXC12P31275 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
HOXC12P31275 REXO1L3P-201ENST00000622202 1288 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.76□□□□□ -0.05
HOXC12P31275 AL513210.1-201ENST00000629608 234 ntBASIC14.76□□□□□ -0.05
HOXC12P31275 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.76□□□□□ -0.05
HOXC12P31275 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HOXC12P31275 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.76□□□□□ -0.05
HOXC12P31275 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HOXC12P31275 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HOXC12P31275 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HOXC12P31275 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.75□□□□□ -0.05
HOXC12P31275 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 AC131009.4-201ENST00000624048 1740 ntBASIC14.75□□□□□ -0.05
HOXC12P31275 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 AL121761.2-201ENST00000598007 1648 ntBASIC14.75□□□□□ -0.05
HOXC12P31275 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms