Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SHC1P29353 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SHC1P29353 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SHC1P29353 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
SHC1P29353 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHC1P29353 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.04
SHC1P29353 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SHC1P29353 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHC1P29353 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHC1P29353 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHC1P29353 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHC1P29353 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.27■□□□□ 0.04
SHC1P29353 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.27■□□□□ 0.04
SHC1P29353 MED15P5-201ENST00000423150 992 ntBASIC15.27■□□□□ 0.04
SHC1P29353 POLD2P1-201ENST00000511220 997 ntBASIC15.27■□□□□ 0.04
SHC1P29353 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.27■□□□□ 0.04
SHC1P29353 AC018845.2-201ENST00000568326 409 ntBASIC15.27■□□□□ 0.04
SHC1P29353 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.27■□□□□ 0.04
SHC1P29353 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.27■□□□□ 0.04
SHC1P29353 ACTL9-202ENST00000612068 1252 ntBASIC15.27■□□□□ 0.04
SHC1P29353 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.27■□□□□ 0.03
SHC1P29353 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SHC1P29353 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.27■□□□□ 0.03
SHC1P29353 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHC1P29353 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SHC1P29353 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SHC1P29353 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.26■□□□□ 0.03
SHC1P29353 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.26■□□□□ 0.03
SHC1P29353 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.26■□□□□ 0.03
SHC1P29353 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 AC027601.4-201ENST00000611259 610 ntBASIC15.26■□□□□ 0.03
SHC1P29353 AC010507.1-201ENST00000633895 436 ntBASIC15.26■□□□□ 0.03
SHC1P29353 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SHC1P29353 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.26■□□□□ 0.03
SHC1P29353 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
SHC1P29353 AL513523.2-202ENST00000427283 2040 ntBASIC15.26■□□□□ 0.03
SHC1P29353 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHC1P29353 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms