Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AC087163.2-201ENST00000457299 853 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 MIR4492-201ENST00000581627 80 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 MTDHP3-201ENST00000594186 672 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AC006449.6-201ENST00000612330 2296 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AP002414.2-201ENST00000591780 3365 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 REXO1L8P-201ENST00000604378 1897 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 AC002310.6-201ENST00000624451 1377 ntBASIC15.48■□□□□ 0.07
TNFRSF1BP20333 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TNFRSF1BP20333 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 KRT18P35-201ENST00000510488 1269 ntBASIC15.47■□□□□ 0.07
TNFRSF1BP20333 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 AC144831.1-201ENST00000573312 2656 ntBASIC15.47■□□□□ 0.07
TNFRSF1BP20333 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TNFRSF1BP20333 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 SART3-203ENST00000546611 1184 ntBASIC15.46■□□□□ 0.07
TNFRSF1BP20333 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.46■□□□□ 0.07
TNFRSF1BP20333 REXO1L3P-201ENST00000622202 1288 ntBASIC15.46■□□□□ 0.07
TNFRSF1BP20333 AL139288.1-201ENST00000623748 933 ntBASIC15.46■□□□□ 0.07
TNFRSF1BP20333 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNFRSF1BP20333 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms