Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.77■□□□□ 0.28
VCLP18206 PMS2P7-201ENST00000506558 1336 ntBASIC16.77■□□□□ 0.28
VCLP18206 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VCLP18206 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.77■□□□□ 0.28
VCLP18206 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.77■□□□□ 0.28
VCLP18206 AC007967.2-201ENST00000432613 625 ntBASIC16.77■□□□□ 0.28
VCLP18206 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.77■□□□□ 0.28
VCLP18206 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.77■□□□□ 0.28
VCLP18206 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.77■□□□□ 0.28
VCLP18206 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.77■□□□□ 0.28
VCLP18206 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
VCLP18206 AC064836.3-201ENST00000607928 673 ntBASIC16.77■□□□□ 0.28
VCLP18206 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCLP18206 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.77■□□□□ 0.28
VCLP18206 AC022188.1-201ENST00000620960 1664 ntBASIC16.77■□□□□ 0.28
VCLP18206 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCLP18206 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
VCLP18206 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCLP18206 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VCLP18206 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.77■□□□□ 0.27
VCLP18206 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCLP18206 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
VCLP18206 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 AC129492.6-201ENST00000611383 1305 ntBASIC16.76■□□□□ 0.27
VCLP18206 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VCLP18206 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 AC087163.2-201ENST00000457299 853 ntBASIC16.76■□□□□ 0.27
VCLP18206 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VCLP18206 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.76■□□□□ 0.27
VCLP18206 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.76■□□□□ 0.27
VCLP18206 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.76■□□□□ 0.27
VCLP18206 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCLP18206 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.75■□□□□ 0.27
VCLP18206 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.75■□□□□ 0.27
VCLP18206 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
VCLP18206 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.75■□□□□ 0.27
VCLP18206 POLD2P1-201ENST00000511220 997 ntBASIC16.75■□□□□ 0.27
VCLP18206 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.75■□□□□ 0.27
VCLP18206 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
VCLP18206 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.75■□□□□ 0.27
VCLP18206 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCLP18206 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VCLP18206 AC005052.1-201ENST00000625181 2492 ntBASIC16.75■□□□□ 0.27
VCLP18206 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.75■□□□□ 0.27
VCLP18206 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.75■□□□□ 0.27
VCLP18206 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCLP18206 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
VCLP18206 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms