| MUC1 | P15941 | THNSL2-202 | ENST00000343544 | 2052 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DPEP1-203 | ENST00000421184 | 1647 nt | APPRIS P1 TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | OSBPL9-222 | ENST00000531828 | 2210 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DMRTC2-204 | ENST00000596827 | 1675 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CYB561D1-205 | ENST00000430195 | 5077 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC25A45-202 | ENST00000398802 | 2286 nt | APPRIS P1 TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PIGT-257 | ENST00000640210 | 1715 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TPD52L2-204 | ENST00000351424 | 2302 nt | APPRIS P4 TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CORO2B-201 | ENST00000261861 | 3569 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CORO2B-204 | ENST00000566799 | 3566 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PPP1R3E-201 | ENST00000452015 | 4773 nt | APPRIS P1 TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ZNF385A-203 | ENST00000394313 | 2430 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AQP3-201 | ENST00000297991 | 1849 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ABHD3-209 | ENST00000580981 | 1836 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | HSPA8-224 | ENST00000534624 | 2463 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | GML-201 | ENST00000220940 | 723 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PLGRKT-201 | ENST00000223864 | 932 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | MUC1-204 | ENST00000343256 | 648 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CENPM-204 | ENST00000402420 | 688 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ATP6V0CP3-201 | ENST00000417255 | 467 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC098831.1-202 | ENST00000438821 | 336 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TSPY3-202 | ENST00000440483 | 414 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AK2-210 | ENST00000548033 | 936 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC116612.1-201 | ENST00000557144 | 562 nt | TSL 3 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | MIF4GD-205 | ENST00000578305 | 569 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC117500.6-201 | ENST00000624871 | 588 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | FDX1-201 | ENST00000260270 | 3206 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | INSIG1-203 | ENST00000344756 | 2623 nt | TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | HSF2-202 | ENST00000452194 | 2643 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TUBB8P12-201 | ENST00000308911 | 1335 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TUBB7P-202 | ENST00000428444 | 1305 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TUBB8P7-204 | ENST00000567960 | 1332 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC092068.3-201 | ENST00000587894 | 2016 nt | BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | FOXP3-206 | ENST00000557224 | 1371 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | RPAP3-203 | ENST00000432584 | 2133 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | RSRC1-211 | ENST00000480820 | 1410 nt | APPRIS P1 TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PSMC5-202 | ENST00000375812 | 1494 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC083864.1-201 | ENST00000381493 | 1497 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PSMD6-210 | ENST00000492933 | 1495 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC5A6-203 | ENST00000408041 | 2230 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SNCAIP-202 | ENST00000261368 | 3745 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC6A8-201 | ENST00000253122 | 3763 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | C4orf50-202 | ENST00000531445 | 6860 nt | APPRIS P5 TSL 5 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SH2B1-201 | ENST00000322610 | 3095 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PPP1R21-201 | ENST00000281394 | 3137 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | RGS19-202 | ENST00000395042 | 1593 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | BMP7-201 | ENST00000395863 | 4013 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | VIPR1-204 | ENST00000438259 | 2427 nt | TSL 2 BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ZDHHC9-202 | ENST00000371064 | 2473 nt | APPRIS P1 TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TAP2-202 | ENST00000374899 | 2497 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ZSCAN25-201 | ENST00000262941 | 1652 nt | TSL 1 (best) BASIC | 14.3 | □□□□□ -0.12 | | |
| MUC1 | P15941 | NR4A2-203 | ENST00000409108 | 1735 nt | TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ADM5-201 | ENST00000420022 | 1718 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | HPN-202 | ENST00000392226 | 1783 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | EHD2-202 | ENST00000538399 | 1766 nt | TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | UGT3A2-204 | ENST00000513300 | 1924 nt | TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PLIN1-202 | ENST00000430628 | 2900 nt | APPRIS P1 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ITGA9-201 | ENST00000264741 | 7889 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DPEP3-201 | ENST00000268793 | 2018 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | IQCF5-AS1-201 | ENST00000440723 | 2000 nt | TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ZBTB46-201 | ENST00000245663 | 5185 nt | APPRIS P1 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | WDTC1-202 | ENST00000361771 | 4275 nt | APPRIS P3 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC9A2-201 | ENST00000233969 | 5410 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC29A1-202 | ENST00000371713 | 2168 nt | APPRIS P1 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | SLC43A2-204 | ENST00000571650 | 3261 nt | TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DBET-201 | ENST00000630918 | 3363 nt | BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PPIB-201 | ENST00000300026 | 1081 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TSPY2-201 | ENST00000320701 | 1161 nt | APPRIS P5 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AQP12A-201 | ENST00000337801 | 1084 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TSPY2-203 | ENST00000429039 | 779 nt | APPRIS ALT2 TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AQP12A-202 | ENST00000429564 | 1110 nt | APPRIS P5 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC079776.4-201 | ENST00000511039 | 504 nt | BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ABO-202 | ENST00000538324 | 1147 nt | APPRIS P5 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CD63-204 | ENST00000546939 | 779 nt | TSL 3 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | L2HGDH-206 | ENST00000555610 | 804 nt | TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ZFPM1-203 | ENST00000562437 | 502 nt | TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | EWSR1-203 | ENST00000332050 | 2552 nt | TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TMTC2-203 | ENST00000548305 | 2682 nt | TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CDKN2AIP-203 | ENST00000504169 | 2721 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DMKN-209 | ENST00000429837 | 1447 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TRMT2A-202 | ENST00000403707 | 2928 nt | APPRIS P3 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | REEP4-202 | ENST00000334530 | 1476 nt | TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CSNK2A1-203 | ENST00000400217 | 1451 nt | TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | INPP5K-204 | ENST00000421807 | 2988 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | NFKBIA-201 | ENST00000216797 | 1558 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PLAGL1-206 | ENST00000416623 | 3237 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | FAM83G-202 | ENST00000388995 | 5266 nt | APPRIS P1 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | RELT-201 | ENST00000064780 | 3535 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | IL34-202 | ENST00000429149 | 1779 nt | APPRIS P2 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | GSS-201 | ENST00000216951 | 1922 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | AC092143.3-201 | ENST00000565150 | 1900 nt | TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | DAPK1-202 | ENST00000408954 | 5892 nt | APPRIS P1 TSL 2 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | ACTG1-208 | ENST00000575087 | 2001 nt | APPRIS P1 TSL 5 BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PBK-201 | ENST00000301905 | 2118 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PRPF31-201 | ENST00000321030 | 2126 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | GHDC-207 | ENST00000587427 | 2396 nt | APPRIS P1 TSL 1 (best) BASIC | 14.29 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TDRKH-202 | ENST00000368823 | 2751 nt | APPRIS ALT1 TSL 2 BASIC | 14.28 | □□□□□ -0.12 | | |
| MUC1 | P15941 | TRMT2B-201 | ENST00000372935 | 2921 nt | APPRIS P3 TSL 1 (best) BASIC | 14.28 | □□□□□ -0.12 | | |
| MUC1 | P15941 | PDZD8-201 | ENST00000334464 | 9699 nt | APPRIS P1 TSL 1 (best) BASIC | 14.28 | □□□□□ -0.12 | | |
| MUC1 | P15941 | CALU-205 | ENST00000535011 | 3210 nt | TSL 1 (best) BASIC | 14.28 | □□□□□ -0.12 | | |