Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 AL512652.2-201ENST00000625156 1716 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.35■■□□□ 1.01
MS4A1P11836 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.35■■□□□ 1.01
MS4A1P11836 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.35■■□□□ 1.01
MS4A1P11836 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.35■■□□□ 1.01
MS4A1P11836 AL160237.2-201ENST00000556165 472 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
MS4A1P11836 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MS4A1P11836 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 AL031008.1-201ENST00000619963 541 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC21.35■■□□□ 1.01
MS4A1P11836 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 AC104640.1-201ENST00000562617 2109 ntBASIC21.35■■□□□ 1.01
MS4A1P11836 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.35■■□□□ 1.01
MS4A1P11836 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A1P11836 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.34■■□□□ 1.01
MS4A1P11836 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 PRSS29P-201ENST00000440800 595 ntBASIC21.34■■□□□ 1.01
MS4A1P11836 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.34■■□□□ 1.01
MS4A1P11836 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.34■■□□□ 1.01
MS4A1P11836 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 AC104692.2-201ENST00000603054 253 ntBASIC21.34■■□□□ 1.01
MS4A1P11836 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 AC010654.1-201ENST00000615722 808 ntBASIC21.34■■□□□ 1.01
MS4A1P11836 AC148477.8-201ENST00000624298 468 ntBASIC21.34■■□□□ 1.01
MS4A1P11836 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
MS4A1P11836 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
MS4A1P11836 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A1P11836 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A1P11836 PAUPAR-201ENST00000630360 2965 ntBASIC21.33■■□□□ 1.01
MS4A1P11836 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A1P11836 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
MS4A1P11836 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.33■■□□□ 1.01
MS4A1P11836 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.33■■□□□ 1.01
MS4A1P11836 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
MS4A1P11836 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.33■■□□□ 1.01
MS4A1P11836 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
MS4A1P11836 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A1P11836 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms