Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ABCD1P5-201ENST00000445663 754 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 AC079776.4-201ENST00000511039 504 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.53□□□□□ -0.08
SFTPBP07988 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 AL355877.3-201ENST00000622820 899 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.53□□□□□ -0.08
SFTPBP07988 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.53□□□□□ -0.08
SFTPBP07988 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SFTPBP07988 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SFTPBP07988 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
SFTPBP07988 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SFTPBP07988 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.52□□□□□ -0.08
SFTPBP07988 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SFTPBP07988 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.52□□□□□ -0.08
SFTPBP07988 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFTPBP07988 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.52□□□□□ -0.08
SFTPBP07988 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SFTPBP07988 LINC00554-201ENST00000564841 3011 ntBASIC14.52□□□□□ -0.08
SFTPBP07988 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SFTPBP07988 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
SFTPBP07988 FAM197Y8-203ENST00000450145 560 ntBASIC14.52□□□□□ -0.09
SFTPBP07988 FGFR3P6-201ENST00000457012 610 ntBASIC14.52□□□□□ -0.09
SFTPBP07988 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.52□□□□□ -0.09
SFTPBP07988 AC106795.1-205ENST00000512851 1056 ntBASIC14.52□□□□□ -0.09
SFTPBP07988 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SFTPBP07988 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
SFTPBP07988 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
SFTPBP07988 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SFTPBP07988 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 AL645728.1-201ENST00000366221 2101 ntBASIC14.51□□□□□ -0.09
SFTPBP07988 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SFTPBP07988 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 AC026691.1-201ENST00000602502 2017 ntBASIC14.51□□□□□ -0.09
SFTPBP07988 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 AP005117.1-201ENST00000584346 1413 ntBASIC14.51□□□□□ -0.09
SFTPBP07988 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SFTPBP07988 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SFTPBP07988 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SFTPBP07988 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SFTPBP07988 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SFTPBP07988 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms